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posted by martyb on Friday June 05 2015, @08:55AM   Printer-friendly
from the we-know-what-you've-been-up-against dept.

A $25 Blood Test Could Detect Every Virus That has Ever Infected You

Every time a virus gets you sick, your immune system keeps a record. This essentially becomes a kill list that lets your body recognize and readily dispatch of any virus that tries to invade again. Scientists have now created $25 test blood test that prints out this list—an easy and cheap way to find out every virus that's ever made you sick.

To understand how this test, called VirScan, works, you need to know a bit about human immunity. The immune system responds to a viral infection by making antibodies, proteins that then bind to viral proteins and render them useless. Small amounts of these antibodies keep circulating in your blood even after you recover. They lie in wait for the next time you encounter that virus.

Existing tests for viruses—say for HIV or hepatitis C—in fact already look for these antibodies. What makes VirScan different is that it can look for antibodies matching virtually every virus known to infect humans at once. That's 1000 strains from 206 species.

http://gizmodo.com/a-25-blood-test-could-detect-every-virus-thats-ever-in-1709096154

[Also Covered By]: http://www.eurekalert.org/pub_releases/2015-06/hhmi-yvi060115.php

[Abstract]: http://www.sciencemag.org/content/348/6239/aaa0698

VirScan Blood Test to Identify Past Exposure to All Known Human Virus Infections

Harvard University Medical School US researchers have developed a blood test that can determine past exposure to every known human virus infection. It examines virus-specific antibodies present in a drop of blood using bacteriophages:

Prof Stephen Elledge from the Harvard University Medical School US, who led the research team, told Science in Action that the new technique will overcome this limitation [of testing limited numbers of virus strains]: "You can ask questions about all viruses rather than have to do things one at a time, so it allows you to discover connections between different populations or different diseases amongst groups of people. Now that we can look at all viruses, it's a complete game-changer."

Researchers have been working out the genetic sequence - the blueprint - of all human viruses for many years. The team used this information to generate a pool of bacteriophage - viruses that grow easily in the laboratory - with each bacteriophage expressing a tiny fragment of this human-virus blueprint on its surface. Antibodies present in a drop of human blood could then be used as bait to go fishing in this phage pool - only bacteriophage that express protein fragments recognised by the antibodies in the blood sample will be caught. Sequencing the bacteriophage DNA reveals the human viruses that an individual has been exposed to.

The team used their test to interrogate sera obtained from more than 500 people of different ages and living in different global locations. The data showed that the number of virus infections detected in people increased during life. The study also suggested that those living in the US were exposed to fewer infections than people living in South Africa, Thailand or Peru. The greatest number of virus infections that were detected in any single individual was around 80, but the average number was only 10. Prof Elledge thought that this was because some individual virus protein fragments can represent many related viruses.

Commenting on the significance of the new technique Will Irving, professor of virology at the University of Nottingham said: "It is a technology which is probably best applied on a population-basis rather than an individual patient basis. "Whilst its accuracy in defining who had HCV or HIV infection could be massaged up to very respectable levels, I'd be nervous about using it as a diagnostic test to see if an individual patient has HIV infection. "However, it will be a fabulous tool for looking at virus-disease associations which are speculative, or even currently unknown. For example, primary biliary cirrhosis (PBC) has been reported, controversially, to arise from viral infection, so it would be great to compare the virome of PBC patients with those without the disease. Maybe you'd identify a consistent pattern suggesting a specific viral cause.


Original Submission1 Original Submission2

 
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  • (Score: 2) by sudo rm -rf on Friday June 05 2015, @01:02PM

    by sudo rm -rf (2357) on Friday June 05 2015, @01:02PM (#192490) Journal

    Many infections leave behind permanent damage. (I couldn't find the English technical term, my dictionary gives me "persistent defect after healing"*). So having survived a lot of infections does not necessarily make you healthier.

    *for those interested, the medical terms are Reparatio (complete healing) vs. Restitutio ad integrum (defect after healing), not to be confused with the principle of common law [wikipedia.org] by the same name.

    (Offtopic: Is there any reason I don't have any mod points available today? Has the system changed?)

    Starting Score:    1  point
    Karma-Bonus Modifier   +1  

    Total Score:   2  
  • (Score: 2) by juggs on Saturday June 06 2015, @04:51AM

    by juggs (63) on Saturday June 06 2015, @04:51AM (#192790) Journal

    No, the mod point allocation system has not changed (to my knowledge).

    We have had a few glitches since the slashcode to rehash upgrade (15.05 / 15.05.1 - see NCommander's recent stories) that didn't present themselves in dev / staging that have subsequently become apparent when under full load on the live site. It's to be expected given a QA / testing corpus of 1 working in their spare time.

    Let me know if the issue continues (juggs@^that domain in the URL) OR raise it as a new Issue on GitHub https://github.com/SoylentNews/rehash/issues [github.com] OR jump onto IRC (left sidebar or IRC client) and let us know there please - we're not omniscient, we need this feedback.

    Personally I have not seen any issue with Mod point allocation, but that's anecdotal - let us know if you see a problem please :)

    • (Score: 2) by sudo rm -rf on Saturday June 06 2015, @05:47AM

      by sudo rm -rf (2357) on Saturday June 06 2015, @05:47AM (#192801) Journal

      Seems to be working again. I have an idea what could have happend and will try to provoke it. And I will use IRC in the future, promise! :)

      • (Score: 2) by juggs on Saturday June 06 2015, @06:08AM

        by juggs (63) on Saturday June 06 2015, @06:08AM (#192806) Journal

        There was a short time where the backend was falling over like a drunk on a bad weekend, so things were not getting updated consistently, but I think we have it sorted.

        But do let us know if that is not what you experience, we can't be everywhere all the time and some bugs go under the radar. Github Issue would be the preferred route as it has some permanence and the devs can pick them up as and when they are available.

        No need to jump on IRC if you don't want to, I was just listing the ways to get in touch. i.e. we can't fix things unless we know about them :)